2018 OME Annual Users Meeting

The 2018 OME Annual Users Meeting will be held at the University of Dundee from May 30th to June 1st 2018.

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Registration is now CLOSED!

Contact us on the mailing lists if you want to attend; a small number of spaces are available.

Day 1 — Wednesday 30th May, 2018 - Dalhousie Lecture Theatre

09:00 - 09:30

Morning registration with tea/coffee

09:30

Opening and welcome remarks

Jason Swedlow, OME

09:30 - 09:45

Deep Learning Object Segmentation using OMERO, Orbit and Tensorflow

Manuel Stritt, Idorsia Pharmaceuticals

09:45 - 10:00

Using OMERO, OMERO.figure & Zegami

Josh Titlow, University of Oxford

10:00 - 10:15

AutoTx Smart automatic background data transfer for Windows

Niko Ehrenfeuchter, Biozentrum - University of Basel

10:15 - 10:30

Exploring the IDR with KNIME Analytics Platform

Christian Dietz, KNIME GmbH

10:30 - 10:45

ImageJ-OMERO: Bringing the power of ImageJ to the OMERO platform

Alison Walter, LOCI

10:45 - 11:00

OMEGA: a software tool for the management, analysis, and dissemination of intracellular trafficking data that incorporates motion type classification and quality control

Caterina Strambio-De-Castillia, University of Massachusetts Medical School

11:00 - 11:30

Tea/coffee

11:30 - 12:45

Lightning Talks by members of the community

12:45 - 13:45

Lunch

13:45 - 14:15

OME Project Summary and Progress

Jason Swedlow, OME

14:15 - 14:45

Image Data Integration and Publication at Scale: Update on the IDR

Josh Moore, OME

14:45 - 15:15

Update on OME File Formats

Sébastien Besson, OME

15:15 - 15:30

Tools for OME Training and Outreach

Jean-Marie Burel, OME

15:30 - 15:45

Tools for OMERO Users

Will Moore, OME

15:45 - 16:15

Tea/coffee

16:15 - 16:45

Glencoe Software Update

Chris Allan, Glencoe Software

16:45 - 17:20

Introducing a data-standard for fluorescence microscopy: increasing data quality and fidelity for biological measurements

David Grunwald, University of Massachusetts Medical School

17:20 - 17:45

One-minute poster talks

17:45 - 18:30

Poster session with refreshments

19:00

Dinner

Day 2 — Thursday 31st May, 2018 - Dalhousie Teaching Rooms

There will be a series of workshops for Developers and Users that cover various aspects of using OME's tools.

08:45 - 09:00

Arrival with tea/coffee and introduction

09:00 - 10:00

Workshop

10:00 - 11:00

Workshop

11:00 - 11:30

Tea/coffee

11:30 - 12:30

Workshop

12:30 - 13:30

Lunch

13:30 - 14:30

Workshops

14:30 - 15:30

Workshops

15:30 - 16:00

Tea/coffee

16:00 - 17:00

Community workshops

17:00

Wine tasting and buffet dinner

Day 3 - Friday 1st June, 2018 - CTIR Discovery Centre

The final day will be more free-form and attendees will be welcome to work closely with the OME team and each other on any relevant topic. This can include meetings, coding, planning, etc.

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