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2012 OME Annual Users Meeting
The 2012 OME Annual Users Meeting was held at Institut Pasteur in Paris on June 18-19 2012.
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Day 1 — Monday 18th June, 2012
08:30 - 09:00
Registration & coffee
09:00 - 09:10
Welcome & Introduction
Spencer Shorte, Institut Pasteur & Jason Swedlow, OME Dundee
09:10 - 09:35
OME in Dundee
Emma Hill, Dundee
09:35 - 10:00
OMERO: Down Under
Kim Linton, Monash University
10:00 - 10:25
Inspiring application of OMERO – a case study
Steve Rawsthorne, John Innes Centre
10:25 - 10:50
Columbus for HCS and Secondary Analysis
Martin Daffertshofer, PerkinElmer
10:50 - 11:20
Coffee
11:20 - 11:45
The JCB DataViewer: Bringing New Dimensions to Published Image Data
Liz Williams, JCB
11:45 - 12:10
ImageJ2 – ImageJ for the Next Generation of Biological Image Data
Kevin Eliceiri, Univ Wisconsin-Madison
12:10 - 12:35
Using OMERO for yeast high throughput microscopy: from images to networks
Anatole Chessel, Gurdon Institute, Univ of Cambridge
12:35 - 12:45
Group Picture
12:45 - 14:00
Lunch
14:15 - 14:15
Satellite Overview
Jason Swedlow, OME Dundee
14:15 - 14:40
What Can Woolz Bring To OME?
Bill Hill, MRC-HGU
14:40 - 15:05
CellOrganizer, PatternUnmixer and OMERO
Bob Murphy, Carnegie Mellon University
15:05 - 15:30
Icy–An Open-Source Community Image Processing Software
Jean-Christophe Olivo-Marin, Institut Pasteur
15:30 - 16:00
Coffee
16:00 - 17:30
Josh’s Annual Polling Priorities and Wishes
Josh Moore, OME & Glencoe Software
17:30 - 19:30
Poster Session with Wine & Nibbles
Day 2 — Tuesday 19th June, 2012
08:30 - 09:00
Coffee
09:00 - 09:15
Introduction
09:15 - 10:45
Workshop I
Implementing OMERO
Integrating with Insight
Extending OMERO.web
Integrating Bio-Formats
OMERO Usability & User feedback
10:45 - 11:15
Coffee
11:15 - 12:45
Workshop II
Integrating with Insight
Integrating Bio-Formats
Writing scripts
OMERO Usability & User feedback
12:45 - 14:00
Lunch
14:00 - 15:30
Workshop III
Extending OMERO.web
Integrating Bio-Formats
Integrating OME and ImageJ into KNIME for high-throughput image analysis
OMERO Usability & User feedback
15:30 - 16:00
Coffee
16:00 - 17:00
Feedback & Wrap-up
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