2017-06-06

6th June

Dundee: Will, Petr, Dominik, Mark, Kenny, Jean-Marie, Andreas, Simone, Roger, Balaji,

Remote: Sebastien, Liza, Wilma, Eleanor, David, Simon, Melissa, Emil, Josh,

1. Accepting minutes from [last meeting](https://www.openmicroscopy.org/site/community/minutes/conference-calls/2017/2017-05-30-tuesday-team-meeting)

1. Project Timelines (2-3 minutes each)

1. Spaces

1. [Files/Formats](https://trello.com/b/IBHfAIMP/bio-formats-5-x)/[OME Files](https://trello.com/b/WFYWCvoV/ome-files-0-4-0) (Sebastien)\

1. Bio-Formats 5.5.2

- Trello board with few bug-fixes. External PR

- Small release soon

1. OME Files 0.4.0

- Tiling api and options work

- Testing tiling benchmarks

- 2 benchmarks - need to make scripts etc reusable

- Java code for writing large images getting reviewed today

- Later this week will test C++ code

- CMSO multimot prep for Essen? Workshop in 3 weeks

- preparatory work on OME FIles Python, OME-TIFF companion filesets

1. Tiling benchmark

1. CMSO/MULTIMOT workshop

1. [Metadata](https://trello.com/c/XQXwX6jj/6-metadata) (Josh)

1. Working on 0.4.0 release

- No known blockers

- Spin up 5.3.0 and start importing soon

- Most remaining TODOs are ‘analysis’. Maybe rename board?

1. Upcoming outreach (training & conferences)

1. General “analysis” strategy - proteosome

- Priorities of above will determine which servers to focus on

1. [OMERO 5.3.2](https://trello.com/b/99FNECY9/omero-5-3-2)

- Cleaning up 5.3.3 board, focus on CLI and major bugs

- 5.3.3 probably last release before 5.4.x ‘roles’ becomes develop

- Dom is looking at Java client code to deprecate - need to announce when known

- Alex’s ImageJ plugin is lighter-weight tool for browsing P/D/I and opening image in regular IJ viewer.

1. [Outreach](https://trello.com/b/Da6OAWam/outreach)

- Cambridge workshop 7th & 8th December.

- Cytohack 28-29 June

- Big Data in Biology 25-27 Sep

- Internal training Dundee in June? TBD with Graeme

- IDR into - 28th June - Cambridge

1. Other releases/upgrades:

1. Figure

- Release soon, few features merged

- Testing dev console scripting

1. Iviewer

- Good feedback from meeting

- 20th June next release

- viewer-ng board in Trello. Add to inbox

- We will maintain omero_fpbioimage 3D viewer. New board created

1. new website

- e-mails discussing next steps

- Blockers for production?

- Will go live, with old website still available

- Ongoing styling work to be integrated in next few weeks

- Moving away from Foundation framework

- New urls likely for ome-documentation & staging

- Workflow for docs PRs won’t change

1. Sysadmin (current board and recent PRs)

- Various web apps installed on nightshade. FBbioimage, webtagging, iviewer & figure updated

- ci upgraded and now open to public with latest Jenkins and plugins

- Demo server deploy ongoing - deadline on Friday

1. Glencoe Update (Chris)

- Thanks to OME team for the meeting

- Microservices work. See thumbnails example

- Next: tiles microservice

- Populate metadata fixes - for resolving on images

- Josh: auto parse ID as Number or Name

https://github.com/glencoesoftware/omero-ms-thumbnail

1. POTN review (20-25 minutes plus 15 mins questions max)

1. Closing [POTN 2017 board](https://trello.com/b/2p0svfga/potn-2017) if there are no objections.

1. Josh to migrate [Day 3 cards](https://trello.com/b/LOP6rdXY/ome2017-day3) and close board.

1. POTN feedback for [OME 2017 board](https://trello.com/b/Laa7ES2O/ome2017) should be added by close of business *today*.

1. AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled)

1. Josh: Private emails - redirect to public lists