2018-02-27

Dundee: Will, Simon, Helen, Balaji, Mark, June, Dom, Petr, Roger, Riad,

Remote: Kenny, JM, Seb, Chris, Wilma, Josh, Liza, David, Emil, Melissa

Start: 2:00 pm

1. Accepting minutes from last meeting

2. Project Status

(2-3 minutes each)

• West (Workflows)

  • OMERO 5.4.4 release scheduled for 7th March including secvuln

    1. Rc1 scheduled for 01/03

    2. Seb: completing the CI adjustments to write downloads/docs

       to the new storage

  • iviewer 1.0.0:

    1. Layout issues now fixed. Testing encouraged.

    2. rc for TIM (presentation next week)

  • IDR 0.4.6 focused on analysis and public API access

    1. Seb: round of testing & when & who?

  • BF: PRs to be reviewed

    1. David to triage. Start review post releases

• East (infra/IDR 0.5.0)

  • systems (& links)

    1. All public web accessible files are on ome/”IDR” GPFS

    2. Data_repo in progress, squig/data_repo is deprecated

    3. Docs linkchecker still has regular failures

  • Buildsystems

    1. CI Master under heavy CPU load

  • Microsystems

    1. Riad has broken stuff out.

    2. Multiple build systems: Gradle vs Maven

  • read-only systems

    1. Java code from metadata53 now largely adapted for 5.4 but

       only lightly tested.

    2. Now to work on metadata53 Python code for tables.

    3. Still unaddressed: Bio-Formats cache memo files.

  • Dom is taking over idr0040 from Balaji

• Glencoe

  • Upgrading to 5.4. OMERO, BF, microservices.

  • Improving options for centralised microservice configuration.

  • Investigating large multi-channel images

• Community

  • Users Meeting

    1. Registration now open until 30 April
  • JM: omero-parade now pip-installable (side project)

    https://trello.com/c/8preLBFk/2-prep-migration

    1. Chris: needs to move to OME before we can work with it

    2. Need to update to latest React.js (for new license)

  • Human Protein Atlas (HPA) call

    1. See notes in IDR Weekly, Feb. 26

    2. Will start with a small 300GB sample of data

1. AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

• Farewell to Balaji.

1. Main Topic

(20-25 minutes plus 15 minutes questions max)