2018-05-15

Dundee: Will, Mark, Kenny, Dominik, Roger, June, Riad,

Remote: Sebastien, Jean-Marie, Josh, Andreas, Liza, David, Jason, Melissa, Chris, Wilma

Start: 2:00 pm

1. Accepting minutes from last meeting

2. Project Status

(2-3 minutes each)

• West

  • OMERO 5.4.6 - out last week. Demo/Nightshade updated

    • Will deploy on outreach server for OME meeting and MacMini

      for ELMI (week after user meeting)

  • Training hackathon

    • Petr in Cambridge. See activity in #general

    • Feedback from Petr: prep on training repo and presentation

      was crucial. Data + public repositories

    • Follow same pattern for OME users meeting - everything

      public, linked and tagged

  • OMERO.web apps for user meeting

    • iviewer: final PRs then 0.5.0 will go out. (early next week

      if possible)

      • Needs support for large number of channels

      • Discussed ROI compliance with different clients

    • Figure: early next week (early next week if possible)

      • Last PRs open

      • Testing upgrade of old figures -> new model on

        web-dev-latest

    • Parade: on-going work

    • [Metadata

      workshop</u>](https://docs.google.com/document/d/1qXFzeIlijNUDxjRSAIEYZmmeiS4OCREyP_xq7BXOMBs/edit#)

      • Still some work to do but the bulk of it is there now.

        Feedback welcome

  • KLB reader David

    • Currently working and testing for Demo

    • PR to be opened today

• East

  • IDR 0.5.0: out, otherwise backburnered - no dev on 51 yet

  • OME-TIFF pyramids: difficulties with writing (Roger)

    • Need shorter term solution for Users Meeting.

  • Microservices: moving to testing, also some naming issues

    • Good progress on incubator projects

    • Can load JSON without touching Python code

  • Ops: Apex work and then various monitoring activities

    • Probably use an orca server for OME meeting

• Glencoe (Chris)

  • Parade progress - prep for webinar

    • Focus on Screening data

    • Image counts getting higher - 20 plates - 7500 images

    • 0.1.0 could be tagged soon. Discuss what goes in.

  • 5.4.6 upgrade prep. Memo file update strategy needed.

    • Josh: could use older BF?

    • Chris: won’t compile with < 5.8.2 - API change

• Community

  • Users’ Meeting

    • Jason: program ~finalised

    • June: 67 registered + 1

    • June: Day 2 schedule decided?

      • Seb: PR open to add to website

    • Kenny: extra kg of coffee ordered!

  • IDR (Seb)

    • Next steps: improve data in

    • Add value to new and existing sets

    • Improve UI - specific datasets requirements. E.g. iviewer

      for CycIF

    • Mark: plan to run IDR on mainline BF/OMERO?

    • Seb: we are close. ScreenReader would be good - needs

      scoping

    • Josh: HCA (Human Cell Atlas) Slack - lots of channels

  • HCA (Josh)

    • Discussion about imaging file formats

      • Propose to create hca-imaging channel?

1. AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)