2018-07-03

Dundee: Will, June, Dominik, Petr, Wilma, Simon, Mark,

Remote: Chris, Andreas, David, Melissa, Emil, Sebastien, Jason,

Start: 2:00 pm

1. Accepting minutes from last meeting

2. Project Status

(2-3 minutes each)

• Summer epics

  • Training/analysis

    • TOPIM

      • Will: scripts/notebooks ready. First runthrough on

        Friday. Still a bit rusty but got a good feeling of where things are.

      • Few cleanup, things to sort out

      • ANother run-through later this week

        • Seb: need attendees? Will: probably okay just w/

          Petr (5h workshop!)

      • Going through presentation on Friday

      • Ideally, deploy presentations live on downloads early

        next week

    • IDR analysis

      • Status/timeline of deployment of idr-analysis with

        CellProfiler notebook?

      • Simon: can do nowish. Petr: asap would be good to

        anticipate problems

  • Upcoming releases

    • Bio-Formats 5.9.0

      • Release today. Tagged and artifacts available. Nearing

        public announcement by end of day.

    • OMERO 5.4.7

      • Outstanding PRs being processed / reviewed

      • Read-only pyramid fix - last-minute, may not have time

        to test

  • Import

    • Mark: [bin/omero fs

      importtime</u>](https://github.com/openmicroscopy/openmicroscopy/pull/5791) can now store import phase durations and counts in map annotations on filesets and summarize that data in machine-readable output.

    • Easier to monitor impact of performance changes

• Glencoe Chris:

  • Microservice stuff…

  • BF etc.

• Community:

  • Jason: EBI meeting - details later.

    • HCA planning etc

    • BBSRC project IDR-biostudies interaction. Bio-image-archive

      discussion with team.

    • Community; SSBD, biostudies communication. E.g. Slack

      channels

1. AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

1. Main Topic

(20-25 minutes plus 15 minutes questions max)