2021.03.02
Attending: Will, Petr, June, David, Frances, Wilma, Dom, Josh, Seb, Jean-Marie, Jason, Kevin, Melissa, Chris, Emil, Erin
Start: 2:00 pm UK
Project Status
(2-3 minutes each)
- IDR:
- Released this morning with 2 new studies. idr0090 and idr0099
- 2 new organisms - malaria and beetles
- NGFF
- Benchmarking
- uploading 200 GB to s3
- Graphs looking good
- Quite a bit of hard-coding, but working
- Community & Specs
- ngff call last week has resulted in lots of active discussion
- next step - concrete implementation suggestions
- Zarr
- Java
- No v3 implementation in the works. Bit of a holding pattern.
- Python
- merging into master branch for V3
- will be a little unstable for a bit
- Releases
- released OMERO.matlab: 5.5.4
- released OMERO.insight: 5.5.17
- web: PRs ready and under review
- Glencoe
- Helping Josh with cloud testing for ngff
- BF2raw and raw2ometiff updates with jzarr
- Emil working with CellProfiler-OMERO connection
- Moving from Java to Python API
- File-format support work from vendors
- Community
- GBI: OMERO/IDR training Australia
- need to handle time-difference
AOB
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
Main Topic
(20-25 minutes plus 15 minutes questions max)