2024-05-14

Attending: Will, Dom, David, Khaled, June, Frances, Andreas, Petr, Tom, Kyle, Melissa, Chris, Seb, David S, Erin,

Start: 2:00 pm UK

Accepting minutes from last meeting

Project Status

(2-3 minutes each)

• IDR (Frances)
  • prod121 release (Rocky 9) pending issues with DB performance during searchengine indexing - timeout errors etc. Also timeout with mapr queries in webclient.
  • Khaled upgraded Postgres 13 -> 16 (including dump and restore the DB), seems to resolve issues. Improved indexing times, but some mapr queries still slow.
  • After release, new idr-testing for NGFF upgrade test
  • Chris: important to identify what the issue was for update of other OMERO servers on Rocky 9.
• OMERO
  • Andreas: preparing next omero-web release
  • Seb: OMERO.server recent release 5.6.11, Insight 5.8.4, etc.
• Bio-Formats
  • ZarrReader PR review nearly done
  • OME meeting prep in progress

• NGFF

• GerBI
  • Tom: OME and ELMI meeting prep…
• Glencoe
  • Chris: tables work: exploring backends etc.
    • poor interaction with webclient with large amounts of data
  • Erin: will present some OMERO.tables workflows at OME meeting, omero2pandas, QuPath, NGFF label images etc.
• Community (June)
  • Google drive for OME meeting registrants
  • Attendees have signed up for Posters, Lightning talks etc.
  • Need a plan for signing-up workshop participants. Ask attendees when registration closes?
  • Petr: OME meeting workshop planning
  • Petr: ELMI and Panama workshops upcoming

AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

Main Topic

(20-25 minutes plus 15 minutes questions max)